BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039B02SP1|AL430653
(925 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1284 1530 0.0
>3x_Contig1284
Length = 6170
Score = 1530 bits (770), Expect = 0.0
Identities = 773/776 (99%)
Strand = Plus / Minus
Query: 150 acttgagaaagactaamagtgaaggatgaacaattggctcttgatgtctgatggttccaa 209
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6170 acttgagaaagactaaaagtgaaggatgaacaattggctcttgatgtctgatggttccaa 6111
Query: 210 ccgcagattcacaccagaatatcaaacagtactccgaaatcccagaaataaagcacaaaa 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6110 ccgcagattcacaccagaatatcaaacagtactccgaaatcccagaaataaagcacaaaa 6051
Query: 270 maactgcgataggttcttcttcggttgtgaaaaagataattcgctatgtcgatattagtc 329
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6050 aaactgcgataggttcttcttcggttgtgaaaaagataattcgctatgtcgatattagtc 5991
Query: 330 gtaaccagattttgggcttttctatagcctggctttggccatatggtcgatgtgcaagct 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5990 gtaaccagattttgggcttttctatagcctggctttggccatatggtcgatgtgcaagct 5931
Query: 390 taacgtagctagttaagttgataatggatacctgaatacgtatatcatctcaggtgacgg 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5930 taacgtagctagttaagttgataatggatacctgaatacgtatatcatctcaggtgacgg 5871
Query: 450 ttgtacttgtatttctggaagccaaagtactggaaaggttatgttagggttcttgtaagt 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5870 ttgtacttgtatttctggaagccaaagtactggaaaggttatgttagggttcttgtaagt 5811
Query: 510 tccgtttcctgatggccattttcaattttcttgatctttgatcgcttatgagcgactgtg 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5810 tccgtttcctgatggccattttcaattttcttgatctttgatcgcttatgagcgactgtg 5751
Query: 570 gatcttaaggcagggtacccgtgttacatatgamttattctcttttggacaataggtgtt 629
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5750 gatcttaaggcagggtacccgtgttacatatgaattattctcttttggacaataggtgtt 5691
Query: 630 acccgatcatgtagcggtttatctgttcacgtgacctaatattccttcgaactttccaat 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5690 acccgatcatgtagcggtttatctgttcacgtgacctaatattccttcgaactttccaat 5631
Query: 690 gcaataagaagaaaaggccccatcgccgaattttcaaattgttatgaatgttctattgga 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5630 gcaataagaagaaaaggccccatcgccgaattttcaaattgttatgaatgttctattgga 5571
Query: 750 catgcatatatactttccaccggcagtacaccgtcttcattggtttttgtttcagttgtt 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5570 catgcatatatactttccaccggcagtacaccgtcttcattggtttttgtttcagttgtt 5511
Query: 810 gattgtgtgattaccttccacgttcatcatccaatacatactatgtggaagaaactgccc 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5510 gattgtgtgattaccttccacgttcatcatccaatacatactatgtggaagaaactgccc 5451
Query: 870 tcacctggatggttggcattcggtactgtggtcaccgttgcgggttccggtatcgc 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5450 tcacctggatggttggcattcggtactgtggtcaccgttgcgggttccggtatcgc 5395
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6969
Number of Sequences: 1807
Number of extensions: 6969
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 925
length of database: 10,358,551
effective HSP length: 16
effective length of query: 909
effective length of database: 10,329,639
effective search space: 9389641851
effective search space used: 9389641851
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)